User:DCDuring/List of sequenced animal genomes/List of sequenced animal genomes 2016/October 2014
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- Amphimedon queenslandica WSp, a sponge (2009[1])
- Mnemiopsis leidyi WSp, (order Lobata WSp) (2012[2])
- Trichoplax adhaerens, a placozoan (2008[3])
- Hydra magnipapillata, a model medusozoan (2010[4])
- Nematostella vectensis, a model anemone (starlet sea anemone) (2007[5])
- Strongylocentrotus purpuratus, a sea urchin and model deuterostome (2006[6])
- Saccoglossus kowalevskii, an acorn worm (2009[7])
- Ciona intestinalis, a tunicate (2003[8])
- Ciona savignyi, a tunicate (2007[9])
- Branchiostoma floridae, a lancelet (2008[10])
- Petromyzon marinus, a lamprey (2009,[11] 2013[12])
Cartilaginous Fish
[edit]- Callorhinchus milii, an elephant shark (2007[13])
Bony Fish
[edit]- Order Beloniformes
- Oryzias latipes, medaka (2007)[14]
- Order Coelacanthiformes
- Latimeria chalumnae, West Indian Ocean coelacanth and oldest known living lineage of Sarcopterygii (2013[15][16])
- Order Cypriniformes
- Danio rerio, a zebrafish (2007[17])
- Order Cyprinodontiformes
- Xiphophorus maculatus, platyfish (2013[18])
- Order Esociformes
- Esox lucius, northern pike (2014[19])
- Order Gadiformes
- Gadus morhua, Atlantic cod (2011[20])
- Order Gasterosteiformes
- Gasterosteus aculeatus, three-spine stickleback (2006, 2012[21])
- Order Lepisosteiformes
- Order Salmoniformes
- Oncorhynchus mykiss, rainbow trout (2014[23])
- Order Tetraodontiformes
- Takifugu rubripes, a puffer fish ([24] International Fugu Genome Consortium[25] 2002[26])
- Tetraodon nigroviridis, a puffer fish (2004[27])
Amphibians
[edit]- Xenopus tropicalis, western clawed frog (2010[28])
Reptiles
[edit]- Order Crocodylia
- Crocodylus porosus, saltwater crocodile (2007)[29]
- Alligator mississippiensis, American alligator (2012)[30]
- Gavialis gangeticus, Indian gharial (2012)[31]
- Order Squamata
- Anolis carolinensis JBL SC #1, green anole lizard (2011[32])
- Python molurus bivittatus, Burmese python (2013)[33]
- Ophiophagus hannah, king cobra (2013)[34]
- Order Testudines (Chelonii)
- Chelonia mydas, green sea turtle (2013[35])
- Pelodiscus sinensis, soft-shelled turtle (2013[35])
- Chrysemys picta bellii, western painted turtle (2013)[36]
Birds
[edit]- Order Anseriformes
- Anas platyrhynchos, Template:WPLook (or wild duck) (2013[37])
- Order Falconiformes
- Falco cherrug, Template:WPLook (2013[38])
- Falco peregrinus, peregrine falcon (2013[38])
- Order Galliformes
- Gallus gallus, chicken (2004[39])
- Meleagris gallopavo, Template:WPLook (2011[40])
- Tetrao tetrix WSp ⇒ Lyrurus tetrix, black grouse (2014[41])
- Order Passeriformes
- Ficedula albicollis WSp, Template:WPLook (2012[42])
- Ficedula hypoleuca WSp, Template:WPLook (2012[42])
- Taeniopygia guttata WSp, zebra finch (2010[43])
Mammals
[edit]- Subclass Prototheria, Order Monotremata, Family Ornithorhynchidae
- Ornithorhynchus anatinus, Platypus (2007[44])
- Subclass Theria (Marsupials and Placental Mammals)
- Infraclass Metatheria (Marsupials)
- Order Didelphimorphia, Family Didelphidae (Opossums)
- Monodelphis domestica, gray short-tailed opossum (2007[45])
- Order Dasyuromorphia, Family Dasyuridae
- Sarcophilus harrisii, Tasmanian devil ([46])
- Order Diprotodontia
- Family Macropodidae
- Macropus eugenii, Tammar wallaby (2011[47])
- Family [Phascolarctidae]]
- Phascolarctos cinereus, koala (2013 draft[48])
- Infraclass Eutheria (Placental Mammals)
- Order Erinaceomorpha, Family Erinaceidae
- Order Chiroptera
- Family Megadermatidae
- Megaderma lyra, greater false vampire bat (2013[50])
- Family Mormoopidae
- Pteronotus parnellii, Parnell's mustached bat (2013[50])
- Family Pteropodidae
- Pteropus vampyrus, fruit bat (2012[51])
- Eidolon helvum, Old World fruit bat (2013[50])
- Family Rhinolophidae
- Rhinolophus ferrumequinum. greater horseshoe bat (2013[50])
- Family Vespertilionidae
- Myotis lucifugus, little brown bat (2010[52])
- Order Primates
- Family Galagidae
- Otolemur garnettii, small-eared galago, or bushbaby ([53])
- Family Cercopithecidae
- Macaca mulatta, rhesus macaque (2007[54])
- Family Hominidae
- Subfamily Ponginae
- Pongo pygmaeus/Pongo abelii, Orangutan (Borneo/Sumatra) (2011[55])
- Subfamily Homininae
- Gorilla gorilla, western gorilla (2012[56])
- Homo sapiens, Modern Human (Draft 2001[57][58] Complete 2006[59])
- Homo neanderthalensis, Neanderthal (Draft 2010[60])
- Pan troglodytes, Chimpanzee (2005[61])
- Pan paniscus, Bonobo (2012[62])
- Family Callitrichidae
- Callithrix jacchus, Marmoset (2010,[63] whole genome 2014[64])
- Order Carnivora
- Family Felidae
- Felis silvestris catus, Cat (2007[65])
- Panthera leo, African Lion (2013[66])
- Panthera leo krugeri, white lion (2013[66])
- Panthera tigris altaica, Amur tiger (also called Siberian Tiger) (2013[66])
- Panthera tigris tigris, Bengal Tiger (2013[66]
- Panthera uncia, Snow Leopard (2013[66])
- Family Canidae
- Canis lupus familiaris, Dog (2005[67])
- Family Ursidae
- Ailuropoda melanoleuca, Giant panda (2010[68])
- Order Cetacea, Family Delphinidae
- Tursiops truncatus, Bottlenosed dolphin (2012[51])
- Order Proboscidea, Family Elephantidae
- Loxodonta africana, African Elephant (2009[69])
- Order Perissodactyla (Odd-toed ungulates), Family Equidae
- Equus ferus caballus, Horse (2009[70])
- Order Artiodactyla (Even-toed ungulates)
- Family Suidae
- Sus scrofa, Pig (2012[71])
- Family Bovidae, Genus Bos
- Bos grunniens, Yak 2012 ([72])
- Bos primigenius indicus, zebu or Brahman cattle (2012[73])
- Bos primigenius taurus, Cow 2009 ([74])
- Order Rodentia
- Family Muridae
- Mus musculus Strain: C57BL/6J, Mouse (2002[75])
- Rattus norvegicus, Rat (2004[76])
- Order Lagomorpha
- Family Leporidae
- Oryctolagus cuniculus, European rabbit (2010[49][77])
Protostomia
[edit]Insects
[edit]Coleoptera
[edit]- Dendroctonus ponderosae WSp Hopkins, Beetle (Template:WPLook) (2013[78])
- Tribolium castaneum WSp Strain:GA-2, Beetle (Template:WPLook) (2008[79])
Diptera
[edit]- Aedes aegypti Strain:LVPib12, Mosquito (Vector of dengue fever, etc.) (2007[80])
- Anopheles darlingi WSp
- Anopheles gambiae WSp Strain: PEST, Mosquito (Vector of malaria) (2002[81])
- Anopheles gambiae Strain: M, Mosquito (Vector of malaria) (2010[82])
- Anopheles gambiae Strain: S, Mosquito (Vector of malaria) (2010)[82])
- Anopheles sinensis WSp, mosquito (vector of vivax malaria, lymphatic filariasis and Setaria infections, (2014)[83]
- Anopheles stephensii WSp
- Clogmia albipunctata WSp, Template:WPLook (Transcriptome 2013[84])
- Culex quinquefasciatus WSp, Mosquito (Vector of West Nile virus, filariasis etc.) (2010[85])
- Drosophila ananassae WSp, Template:WPLook (2007[86])
- Drosophila biarmipes WSp, Fruit fly (2011[87])
- Drosophila bipectinata WSp, Fruit fly (2011[87])
- Drosophila erecta WSp, Fruit fly (2007[86])
- Drosophila elegans WSp, Fruit fly (2011[87])
- Drosophila eugracilis WSp, Fruit fly (2011[87])
- Drosophila ficusphila WSp, Fruit fly (2011[87])
- Drosophila grimshawi WSp, Fruit fly (2007[86])
- Drosophila kikkawai WSp, Fruit fly (2011[87])
- Drosophila melanogaster, Fruit fly (Model organism) (2000[88])
- Drosophila mojavensis WSp, Fruit fly (2007[86])
- Drosophila persimilis WSp, Fruit fly (2007[86])
- Drosophila pseudoobscura WSp, Fruit fly (2005[89])
- Drosophila rhopaloa WSp, Fruit fly (2011[87])
- Drosophila santomea WSp, Fruit fly ([90])
- Drosophila sechellia WSp, Fruit fly (2007[86])
- Drosophila simulans WSp, Fruit fly (2007[86])
- Drosophila takahashi WSp, Fruit fly (2011[87])
- Drosophila virilis WSp, Fruit fly (2007[86])
- Drosophila willistoni WSp, Fruit fly (2007[86])
- Drosophila yakuba WSp, Fruit fly (2007[86])
- Episyrphus balteatus WSp, hoverfly (Transcriptome 2011[91])
- Megaselia abdita WSp, scuttle fly (Transcriptome 2013[84])
Hemiptera
[edit]- Acyrthosiphon pisum WSp, Aphid (Template:WPLook) (2010[92])
Hymenoptera
[edit]- Acromyrmex echinatior WSp colony Ae372 Ant (Template:WPLook) (2011[93])
- Apis mellifera WSp Bee (honey bee), (Model for eusocial behavior) (2006[94])
- Atta cephalotes WSp, Ant (leaf-cutter ant) (2011[95])
- Camponotus floridanus WSp, Ant (2010[96])
- Herpegnathos saltator WSp, Ant (2010[96])
- Linepithema humile WSp, Ant (Template:WPLook) (2011[97])
- Nasonia giraulti WSp, Wasp (Parasitoid wasp) (2010[98])
- Nasonia longicornis WSp, Wasp (Parasitoid wasp) (2010[98])
- Nasonia vitripennis WSp, Wasp (Parasitoid wasp; Model organism) (2010[98])
- Pogonomyrmex barbatus WSp, Ant (Template:WPLook) (2011[99])
- Solenopsis invicta WSp, Ant (fire ant) (2011[100])
Lepidoptera
[edit]- Bombyx mori Strain:p50T, Moth (domestic silk worm) (2004[101])
- Danaus plexippus, Butterfly (monarch butterfly) (2011[102])
- Heliconius melpomene WSp, Butterfly (2012)
- Plutella xylostella WSp, Moth (Template:WPLook) (2013[103])
Phthiraptera
[edit]- Pediculus humanus WSp, Louse (sucking louse; Parasite) (2010[104])
Crustaceans
[edit]- Daphnia pulex WSp, water flea (2007[105][106][107])
Chelicerates
[edit]- Ixodes scapularis WSp, deer tick (vector of meningitis and Lyme disease) (2008[108])
- Tetranychus urticae WSp Template:WPLook (2011[109])
Molluscs
[edit]- Crassostrea gigas WSp, Template:WPLook (2012[110])
- Lottia gigantea WSp, Template:WPLook (2013[111])
Platyhelminthes
[edit]- Clonorchis sinensis WSp, Liver fluke (Human pathogen) (Draft 2011[112])
- Echinococcus granulosus WSp, Tapeworm (Dog pathogen) (2013,[113] 2013[114])
- Echinococcus multilocularis WSp, Tapeworm (2013[113])
- Hymenolepis microstoma WSp, Tapeworm (2013[113])
- Schistosoma haematobium WSp, Schistosome (Human pathogen) (2012[115])
- Schistosoma japonicum WSp, Schistosome (Human pathogen) (2009[116])
- Schistosoma mansoni WSp, Schistosome (Human pathogen) (2009,[117] 2012[118])
- Schmidtea mediterranea WSp, Planarian (Model organism) (2006[119][120])
- Taenia solium WSp, Tapeworm (2013[113])
Nematodes
[edit]- Ascaris suum WSp, Human pathogen (2011 [121])
- Brugia malayi WSp, Strain:TRS, Human pathogen (2007[122])
- Caenorhabditis briggsae WSp (2003[123])
- Caenorhabditis elegans, Strain:Bristol N2, Model organism (1998[124])
- Meloidogyne hapla WSp, Template:WPLook (Plant pathogen) (2008[125])
- Meloidogyne incognita WSp, Template:WPLook (Plant pathogen) (2008[126])
- Pristionchus pacificus WSp, Model invertebrate (2008[127])
Annelids
[edit]- Capitella teleta WSp, Polychaete (2007,[128] 2013[111])
- Helobdella robusta WSp, Leech (2007,[129] 2013[111])